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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881284.1_cds_XP_016437718.1_33452
CDS Infomation

[gene=LOC107763741] [db_xref=GeneID:107763741] [protein=caffeoylshikimate esterase-like] [protein_id=XP_016437718.1] [location=join(190814..190859,190956..191146,192545..192574,193698..193824,193908..194054,194299..194429,194518..194655,194921..195019,197280..197492)] [gbkey=CDS]
Sequence

ATGGCCTTGAAGCCTGGGAAGTTTTTTAGGAGGCACTCAATAGATGCATACAGAACCAAG
GAAGTCAATTCAGTGAGGAGTGAGAAAGCAGTGATGGGGAAGCCAGTGAAGTTTCAAGGT
ATAAGTGAAGAATTGCAGAAGATAATAGATGCAGATATGGACAACGTGGATGCCAGGCGT
CGTGCTAGGGATGCGTTTAAGGATGTTCAGTTGTCAATTGATCATTGCCTGTTCAAGATG
CCACATGCTGGAGTGAAGATGAATGAGTCATATGAGGTTAATTCTCGAGGACTGGAAATC
TACTCCAAAAGTTGGCTTCCAGAGACAAGTCTCCCAAAAGCTATGGTATATTTTTGTCAT
GGTTATGGTGATACATGCACATTTTTTGTTGAAGGCATTGCAAGAAAATTAGCATCGTCT
GGTTATGGAGTATTTGCCATGGATTATCCTGGATTTGGTCTTTCAGAAGGTCTTCATGGC
TACATACCAAGTTTTGACAAGTTAGTTGATGATGTCATCGAGCGTTACTCAAAAGTGAAA
GAAAATGCAGAGATATGTAACCTGCCAAGTTTTCTATTTGGGCAATCAATGGGTGGAGCA
GTAGCTCTGAAGGTGCACCTGAAGCAGCCCGATGCATGGAATGGCGCTGTTCTTGTTGCA
CCTATGTGCAAACTTGCAGATGACATGGTTCCACCGTGGTTAGTAACACAAATTCTAATC
GGTATGGCAAAATTTCTTCCAAAGCAAAAGCTAGTTCCGCAACAGGACTTAGCGGAGTTA
GCATTCCGAGATGTGAAGAAGAGAGAACAGGCCGCCTATAATGTCATTTCTTACAAGCAT
AAACCCCGTCTACGAACTGCAGTGGAGTTACTGCATACCACCCAAGAGATAGAGAAACAA
CTAGATAAGGTCTCTCTGCCATTGCTAATCTTGCATGGAAAGAATGATACTGTTACTGAT
CCATCCATCAGCAAAGCGTTGTACGAGAAGGCAAGTAGTTCGGATAAGAAACTGACTCTT
TATGAGGATGCTTATCATTCTTTACTAGAGGGTGAGCCCGATGAGATGATATTTCGAGTT
CTTGGTGACATAATTTCTTGGCTGGATAACCATACTTCCTAA

Peptide Sequence

PEP ID

XP_016437718.1
PEP Infomation

PREDICTED: caffeoylshikimate esterase-like [Nicotiana tabacum]
Sequence

MALKPGKFFRRHSIDAYRTKEVNSVRSEKAVMGKPVKFQGISEELQKIIDADMDNVDARR
RARDAFKDVQLSIDHCLFKMPHAGVKMNESYEVNSRGLEIYSKSWLPETSLPKAMVYFCH
GYGDTCTFFVEGIARKLASSGYGVFAMDYPGFGLSEGLHGYIPSFDKLVDDVIERYSKVK
ENAEICNLPSFLFGQSMGGAVALKVHLKQPDAWNGAVLVAPMCKLADDMVPPWLVTQILI
GMAKFLPKQKLVPQQDLAELAFRDVKKREQAAYNVISYKHKPRLRTAVELLHTTQEIEKQ
LDKVSLPLLILHGKNDTVTDPSISKALYEKASSSDKKLTLYEDAYHSLLEGEPDEMIFRV
LGDIISWLDNHTS

Transcript Sequence

Gene sequence data has not been registered.